Spatial organization of the somatosensory cortex revealed by cyclic smFISH

Simone Codeluppi, Lars E. Borm, Amit Zeisel, Gioele La Manno, Josina A. van Lunteren, Camilla I. Svensson & Sten Linnarsson. Nature Methods, volume 15, pages932–935 (2018)


We developed a cyclic smFISH protocol, thermed ouroboros smFISH, to quantify the expression of a large number of genes in tissue sections, with the goal to build a cell type map of the mouse somatosensory cortex. Here you will find the supporting data with visualizations of gene expression and cluster localization. You can also interactively explore the data using the Loom viewer.

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  1. Gene expression
  2. Clusters
  3. Interactive data viewer
  4. Data and code availability

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