Perivascular macrophages
This page contains additional data supporting our paper
Origin, fate and dynamics of macrophages at central nervous system interfaces
Tobias Goldmann, Peter Wieghofer, Marta Joana Costa Jordão, Fabiola Prutek, Nora Hagemeyer, Kathrin Frenzel, Lukas Amann, Ori Staszewski, Katrin Kierdorf, Martin Krueger, Giuseppe Locatelli, Hannah Hochgarner, Robert Zeiser, Slava Epelman, Frederic Geissmann, Josef Priller, Fabio M V Rossi, Ingo Bechmann, Martin Kerschensteiner, Sten Linnarsson, Steffen Jung & Marco Prinz.
Published in Nature Immunology (PDF)
Download full dataset
The dataset is available in tab-delimited CEF file format.
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Download Mgl_Pvm_Mono_PMac.cef.
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Use ceftools to browse and filter the file. For example, tally the cell types using this command:
cef --bycol tally --attr Subclass < Mgl_Pvm_Mono_PMac.cef
Which yields
Value Count
Pvm2 33
PMac 167
246
Mgl1 17
Mgl2 16
Pvm1 32
The unnamed cells are the monocytes (as you can see by tallying the “Tissue” attribute).