pysmFISH
  • Welcome to pysmFISH!
  • Installation
  • Cluster setup
  • API
  • Processing pipeline
  • License
  • Author and citations
  • Indices and Tables
pysmFISH
  • Docs »
  • Overview: module code

All modules for which code is available

  • add_coords_to_experimental_metadata
  • apply_stitching
  • dots_coords_correction
  • preprocessing_script
  • process_standalone_experiment
  • pysmFISH.counting
  • pysmFISH.dots_calling
  • pysmFISH.dots_coords_calculations
  • pysmFISH.filtering
  • pysmFISH.hdf5_utils
  • pysmFISH.io
  • pysmFISH.object_based_segmentation
  • pysmFISH.stitching_package.GlobalOptimization
  • pysmFISH.stitching_package.MicroscopeData
  • pysmFISH.stitching_package.hdf5preparation
  • pysmFISH.stitching_package.hybregistration
  • pysmFISH.stitching_package.inout
  • pysmFISH.stitching_package.pairwisehelper
  • pysmFISH.stitching_package.pairwisesingle
  • pysmFISH.stitching_package.stitching
  • pysmFISH.stitching_package.tilejoining
  • pysmFISH.utils
  • reference_registration
  • staining_segmentation

© Copyright 2018, simone codeluppi.

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