Apply stitching to osmFISH channels

apply_stitching.apply_stitching()

Script to apply the registration to all the osmFISH channels. It will create a stitched image in an hdf5 file

All the parameters are entered via argparse

experiment_path: string

Path to the folder with the hybridizations

reference_files_path: string

Path to the folder with the _reg_data.pkl files

scheduler: string

tcp address of the dask.distributed scheduler (ex. tcp://192.168.0.4:7003). default = False. If False the process will run on the local computer using nCPUs-1